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Example data of multiple MetaPhlAn profiles which were merged into one file, and then filtered with filter_taxa_lvl(df, taxa_lvl = "s") to only include species-level.

Usage

species_only

Format

species_only

A data frame with 12 rows and 7 columns:

clade_name

The taxonomic lineage of the taxon reported on this line. Taxon names are prefixed with one-letter codes to help indicate their rank.

SRS0144...

The sample names for which sample-specific abundance profiles are found in a column.